For the AWSEM code and detailed documentation for other functions, please go to http://awsem-md.org. Please feel free to contact Shikai Jin (sj52@rice.edu) for any doubts or suggestions about this server or the AWSEM code.

Please cite us:
[1] Jin S, Contessoto VG, Chen M, et al. AWSEM-Suite: a protein structure prediction server based on template-guided, coevolutionary-enhanced optimized folding landscapes. Nucleic Acids Res. 2020;48:W25-W30. doi: 10.1093/nar/gkaa356

If you are interested in the algorithm, you can read the following papers:
[1] Jin S, Chen M, Chen X, et al. Protein Structure Prediction in CASP13 Using AWSEM-Suite. J Chem Theory Comput. 2020;16:3977-3988. doi: 10.1021/acs.jctc.0c00188
[2] Davtyan A, Schafer NP, Zheng W, et al. AWSEM-MD: Protein Structure Prediction Using Coarse-Grained Physical Potentials and Bioinformatically Based Local Structure Biasing. J Phys Chem B. 2012;116:8494-503. doi: 10.1021/jp212541y
[3] Schafer NP, Kim BL, Zheng W, Wolynes PG. Learning to fold proteins using energy landscape theory. Isr J Chem. 2014;54:1311-37. doi: 10.1002/ijch.201300145

Thank you for using this server!
Nov/2019